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Data Science CoLab

About
About the Data Science CoLab

The Data Science CoLab is a collaboration-based research lab with a focus on systems immunology and computational methods development. Our research centers on understanding patient immune state using single-cell methods, primarily CyTOF and single-cell sequencing, in a variety of contexts including infection, cancer, and at steady-state. We also study the interactions between the immune system and the microbiome at the systems level. We facilitate close collaborations between experimental and computational biologists and provide tools and training for biologists who want to better engage with their data.

Recent Publications

Authors: Van der Wijst Monique G. P., Vazquez Sara E., Hartoularos George C., Bastard Paul, Grant Tianna, Bueno Raymund, Lee David S., Greenland John R., Sun Yang, Perez Richard, Ogorodnikov Anton, Ward Alyssa, Mann Sabrina A., Lynch Kara L., Yun Cassandra, Havlir Diane V., Chamie Gabriel, Marquez Carina, Greenhouse Bryan, Lionakis Michail S., Norris Philip J., Dumont Larry J., Kelly Kathleen, Zhang Peng, Zhang Qian, Gervais Adrian, Le Voyer Tom, Whatley Alexander, Si Yichen, Byrne Ashley, Combes Alexis J., Rao Arjun Arkal, Song Yun S., Fragiadakis Gabriela K., Kangelaris Kirsten, Calfee Carolyn S., Erle David J., Hendrickson Carolyn, Krummel Matthew F., Woodruff Prescott G., Langelier Charles R., Casanova Jean-Laurent, Derisi Joseph L., Anderson Mark S., Ye Chun Jimmie
September 2021
Authors: Weiner January, Suwalski Phillip, Holtgrewe Manuel, Rakitko Alexander, Thibeault Charlotte, Müller Melina, Patriki Dimitri, Quedenau Claudia, Krüger Ulrike, Ilinsky Valery, Popov Iaroslav, Balnis Joseph, Jaitovich Ariel, Helbig Elisa T, Lippert Lena J, Stubbemann Paula, Real Luis M, Macías Juan, Pineda Juan A, Fernandez-Fuertes Marta, Wang Xiaomin, Karadeniz Zehra, Saccomanno Jacopo, Doehn Jan-Moritz, Hübner Ralf-Harto, Hinzmann Bernd, Salvo Mauricio, Blueher Anja, Siemann Sandra, Jurisic Stjepan, Beer Juerg H., Rutishauser Jonas, Wiggli Benedikt, Schmid Hansruedi, Danninger Kathrin, Binder Ronald, Corman Victor M, Mühlemann Barbara, Arjun Arkal Rao, Fragiadakis Gabriela K., Mick Eran, COMET Consortium, Calfee Carolyn S., Erle David J., Hendrickson Carolyn M., Kangelaris Kirsten N., Krummel Matthew F., Woodruff Prescott G., Langelier Charles R., Venkataramani Urmila, García Federico, Zyla Joanna, Drosten Christian, Alice Braun, Jones Terry C, Suttorp Norbert, Witzenrath Martin, Hippenstiel Stefan, Zemojtel Tomasz, Skurk Carsten, Poller Wolfgang, Borodina Tatiana, Pa-COVID Study Group, Ripke Stephan, Sander Leif E, Beule Dieter, Landmesser Ulf, Guettouche Toumy, Kurth Florian, Heidecker Bettina
September 2021

Learn about CoProjects, Incubators, and Plug-in Labs

CoProjects are a series of shared projects designed to integrate our community through common pipelines and data curation. CoLabs CoProjects aim to build immune profiles for untapped streams of human diseases at UCSF.